Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ---------MNYIKNPAKIEEKSFEIIQQIIDDIRPDY-TFQNKLEEAIIKRAIHTTADFDYLDSLVFQQDAIAKIIHVLQNK-----GTIFTDTNMA--------------LSGINKRLLDELGCKYHCYVS----DPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAP---TAVYKIIEMVESGQLQADAVVAVPVGFVGAAECKEEILETDIPAIVARGRKGGSNLAAAIINAILITM- |
| 4LFU Chain:A ((5-240)) | DFFSWRRTMLLRFQR-METAEEVYHEIELQAQQLEYDYYSLCVRHPVPFTRPKVAFYTNYPEAWVSYYQAKNFLAIDPVLNPENFSQGHLMWNDDLFSEAQPLWEAARAHGLRRGVTQYLMLPNRALGFLSFSRCSAREIPILSDELQLKMQLLVRESLMALMRLNDEIVMTPEMNFSKREKEILRWTAEGKTSAEIAMILSI--------SENTVNFHQKNMQKKI--NAPNKTQVACYAAATGLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 4LFU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -62724 for 1405 contacts (-44.6/contact) +
2D Compatibility (PS) -21240 + (NN) -2299 + (LL) 452
1D Compatibility (HY) -3200 + (ID) 1050
Total energy: -90061.0 ( -64.10 by residue)
QMean score : 0.308
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