Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIYVIGIGPGDKRLMTGEALQAIEDAEVIVGYVTY-------IKLIKELIK----DKEVVK--TGMRREI--------DRCQEAVDIALTGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLEVKVIPGITASIGAAAVLGAPIMHDFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYNPRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMQGIDYELVDMTTVVIVGNKETYVKNGKMITPRGYSL
2QBU Chain:A ((4-228))
KLIGVGVGPGDSELLTLRAVNVLRSVPVICAPRSSSERESIALSIVEDILTERRDGCRILDPVFPMTDDRDELESHWDSAARMVAAELEDGRDVAFITLGDPSIYSTFSYLQQRIEDM--GFKTEMVPGVTSFTACAATAGRTLVEGDEILLVVPRVD--DRFERVL----RDVDACVIMKTSR-----HGRRAME-VVESDPRGKDVVSVANCSMDDEVVERGFAS-----GGGYLATTLVRF------------------
General information:
TITO was launched using:
RESULT:
Template:
2QBU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -188931 for 1586 contacts (-119.1/contact) +
2D Compatibility (PS) -23326 + (NN) -13660 + (LL) 1324
1D Compatibility (HY) -6400 + (ID) 1700
Total energy: -232693.0 ( -146.72 by residue)
QMean score : 0.552
(partial model without unconserved sides chains):
PDB file :
Tito_2QBU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2QBU-query.scw
PDB file :
Tito_Scwrl_2QBU.pdb
: