Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ------------------------------MKKAILVVSFGTSYPETREKTIEACEKRVAHEFPDYTVFRAFTSNKIIKKLKTRDNMHINTPSQALNQLKELGYKEVIIQSLHII-----------SGGEF-EKITAQVEKFKPDFDSIIVSQPLLDSMEDYEKAIEAIRHQ--------MPPLKEQEALILMGHGSKHHA------FSAYACLDHMLLNEPIYLC------------AVESYPGLDQVIERLQQADIKKAHLMPF--MLV-AGDHATNDMASDEENSWKSTLEQAGIQTECHLQGLGENPLIQSQFIDHIHTAIERVKTRG- |
| 3KC2 Chain:A ((12-352)) | KKIAFAFDIDGVLFRGKKPIAGASDALKLLNRNKIPYILLTNGGGFSERARTEFISSKLDVDVSPLQIIQSHTPYKSLVN--KYSRILAVGTPSVRGVAEGYGFQDVVHQTDIVRYNRDIAPFSGLSDEQVMEYSRDIPDLTTKKFDAVLVFNDPHDWAADIQIISDAINSENGMLNTLRNEKSGKPSIPIYFSNQDLLWANPYKLNRFGQGAFRLLVRRLYLELNGEPLQDYTLGKPTKLTYDFAHHVLIDWEKRLSGTKPSTSPFHAVFMVGDNPASDIIGAQNYGWNSCLVKTGVYNE----GDDLKECKPTLIVNDVFDAVTKTLEKYA |
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General information:
TITO was launched using:
| RESULT:
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Template: 3KC2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27434 for 1935 contacts (-14.2/contact) +
2D Compatibility (PS) -27600 + (NN) -9422 + (LL) 636
1D Compatibility (HY) -3600 + (ID) 1550
Total energy: -68970.0 ( -35.64 by residue)
QMean score : 0.245
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