Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKSVNVIGAGLAGSEAVWQLVNRGVKVDLYEMRPVKQTPAHHTDKFAELVCTNSLRANGLTNAVGVIKEEMRML-DSIIIEAADKASV-----P--AGGALAVDRHEFSGYITDKVKNHPLVTVHTE---------------------EVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDAAAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEKEVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNMVGFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLFFAGQMTGVEGYVESAASGLAAGINAANFIQEKELVVFPTETAIGSLAHYITSASKKSFQPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKKVAEEL |
| 2QA2 Chain:A ((11-168)) | SDASVIVVGAGPAGLMLAGELRLGGVDVMVLEQLPQRTGE-----SRGLGFTARTM---EVFDQRGILP-AFGPVETSTQGHFG-GRPVDFGVLEGAHYGVKAVPQSTTESVLEEWALGR-GAELLRGHTVRALTDEGDHVVVEVEGPDGPRSLTTRYVVGCDGGRSTV------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QA2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -30022 for 891 contacts (-33.7/contact) +
2D Compatibility (PS) -13257 + (NN) -979 + (LL) 22280
1D Compatibility (HY) 400 + (ID) 1050
Total energy: -22628.0 ( -25.40 by residue)
QMean score : 0.325
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