Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFTVLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE
4NOY Chain:A ((1-73))
MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNWTVLLDVEGKQQLVFKHAISTFSPQKNVALN----
General information:
TITO was launched using:
RESULT:
Template:
4NOY.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -39070 for 444 contacts (-88.0/contact) +
2D Compatibility (PS) -7879 + (NN) -676 + (LL) 32
1D Compatibility (HY) -11200 + (ID) 3550
Total energy: -62343.0 ( -140.41 by residue)
QMean score : 0.658
(partial model without unconserved sides chains):
PDB file :
Tito_4NOY.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4NOY-query.scw
PDB file :
Tito_Scwrl_4NOY.pdb
: