Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTDKIFQEKVGPVALTIVPTQKYK--SNKIVFKFRAPLER---ETVTKRALLSILLETNSEKYPTQTDFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVSDGNHILEDAFAFMEQALFRPNVANDAFNEETLTREKENLKSSLEGIYD-DKIRFASKRLVEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDTIEIFICGDVTKEEVMPL---I-EKMAFSPRPERKGI-F----Y-TKEAPKEVRVI-HEQQAINQGKLVLGYQTETLFGDDDFVALQLANGLLGGFANSKIFINVREKASLAYYASSRIDSF----KGYMIISAGIDEVNYEQALKIIEEQVVAMKQGNFTDDELNQTKEMLINQLLETNDQAQGLIELVYNNVLRDAN--LDLENWIAKIKQATKEEVVAAINKIKPDTIYFLSKGGEELHGKNHI |
| 3CWW Chain:A ((523-932)) | -------KDTAMSKLWFKQDDKFFLPKANLNFEFFSPFAYVDPLHSNMAYLYLELLKD---------SLNEYAYAAELAGLSYDLQN--TIYGMYLSVKGYNDK--------QPILLKKIIEKMATF-----EIDEARFEIIKEAYMRSLNNFRAEQPHQHAMYYLRLLMT-EVAWTK--DELKEALADVTLPRLKAFIPQLLSRLHIEALLHGNITKQAALGIMQMVEDTLIEHAHTKPLLPSQLAAYREVQLPDRGWFVYQQRNEVHNNSGIEIYYQTDMQ-STSENMFLELFAQII----SEPAFNTLRTKEQLGYIVFSGPRRANGIQGLRFIIQSEKPPHYLESRVEAFLITMEKSI-EDMTEEAFQKHIQALAIRRLDKPKKLSAESAKYWGEIISQQYNFDRDNTEVAYLKTLTKADIIKFYKEMLA------------------- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3CWW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -113923 for 2773 contacts (-41.1/contact) +
2D Compatibility (PS) -40477 + (NN) -22535 + (LL) 1952
1D Compatibility (HY) -10400 + (ID) 2450
Total energy: -187833.0 ( -67.74 by residue)
QMean score : 0.482
|
|
|