Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
LELPFSGQSIIPAAHNQKDMEKILELGLTYMVMLETHVAQLKSLVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSACNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW
3KTS Chain:D ((3-184))
LELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKALVKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLAIQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETSEQVNQVIASGAIAVTTSNKHLW
General information:
TITO was launched using:
RESULT:
Template:
3KTS.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -149118 for 1503 contacts (-99.2/contact) +
2D Compatibility (PS) -19580 + (NN) -7041 + (LL) 0
1D Compatibility (HY) -28000 + (ID) 8900
Total energy: -212639.0 ( -141.48 by residue)
QMean score : 0.560
(partial model without unconserved sides chains):
PDB file :
Tito_3KTS.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3KTS-query.scw
PDB file :
Tito_Scwrl_3KTS.pdb
: