Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceVAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEER-NWGGTCVLRGCDPKKVLIGAREARNLST-RLRGKGIKQAATISWTDLMAFKETFVENVPESRLASFQEAGIETFFGAASFQDSHSLQV--GDDLIYAEKIVIATGATPSTLKVEGKE---YIQTSDDFLSLEKLPDSVVFIGGGYISFEFASIALAAGRDVHIIHHNSEPLKKFDPDFVAALVANIKDEGIHFHFDTDITKIENDGGKLHIKGKDSFSLQTDLIIGATGRMPNIAHLSLENASIDYTKKG-IVVNEKLQTPNNPHIYACGDVAATKGAPLTPVVSLEAALVAKNVIGVNEKITYPAIPSVVFTSPKLASIGISTEEAKANPEKYQIKNHDTTSWYTYKRTNEQIALAKIIEDRESGQIKGAHFLSEEADYMINYIAILMKANLTLADLQSVIFAYPSPASDLTALN
2YQU Chain:A ((1-444))----MYDLLVIGAGPGGYVAAIRAAQLGMKVGVVEKEKALGGTCLRVGCIPSKALLETTERIYEAKKGLLGAKVK-GVELDLPALMAHKDKVVQANTQGVEFLFKKNGIARHQGTARFLSERKVLVEETGEELEARYILIATGSAPLIPPWAQVDYERV-VTSTEALSFPEVPKRLIVVGGGVIGLELGVVWHRLGAEVIVLEYMDRILPTMDLEVSRAAERVFKKQGLTIRTGVRVTAVVPEAKGARVELEGGEVLEADRVLVAVGRRPYTEGLSLENAGLSTDERGRIPVDEHLR-TRVPHIYAIGDVV--RGPMLAHKASEEGIAAVEHMVRGFGHVDYQAIPSVVYTHPEIAAVGYTEEELKAQGIPYKVGKFPYSASGRARAMGETEGFIKVLAHAKTDRILGVHGIGARVGDVLAEAALALFFKASAEDLGRAPHAHPSLSEILKEA-


General information:
TITO was launched using:
RESULT:

Template: 2YQU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -256150 for 3859 contacts (-66.4/contact) +
2D Compatibility (PS) -46889 + (NN) -12684 + (LL) 1024
1D Compatibility (HY) -20000 + (ID) 6000
Total energy: -340699.0 ( -88.29 by residue)
QMean score : 0.448

(partial model without unconserved sides chains):
PDB file : Tito_2YQU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2YQU-query.scw
PDB file : Tito_Scwrl_2YQU.pdb: