Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------MKRKIIVGSRRS---KLALTQSNWVINKLKENYPEFDFEIKEIVTKGDRILDVTLSK-----------------VGGKGLF---------VSEVEQALS----------DEAIDFAVHSMKD-VPSSLKEGLI-----------IGAIPKRESPLDCFVF---------------------NQVNSLDELPQGSVI----GTSSLRRAAQLLKHRPD----FVIKPIRG---------NIDTRLQKLHAENFDAIIL--AKAGLARMGWLENTTLKLEDIPPEVCL--PAVGQGALAIECRESDQQIRDMLTS---IHHEETG-------ICVEAERVFLKK-LNGGCEIPIAGFATRANEFVQ-FKGLVGNADGSIILESEQVGANPSEIGNKVAEDLLS-------------------------EGADTIIKELRNV----------- |
| 4UOX Chain:A ((7-459)) | SASALACSAHALNLIEKRTLDHEEMKALNREVIEYFKEHVNPGFLEYRKSVTAGGDYGAVEWQAGSLNTLVDTQGQEFIDCLGGFGIFNVGHRNPVVVSAVQNQLAKQPLHSQELLDPLRAMLAKTLAALTPGKLKYSFFCNSGTESVEAALKLAKAYQSPRGKFTFIATSGAFHGKSLGALSATAKSTFRKPFMPLLPGFRHVPFGNIEAMRTALNECKKTGDDVAAVILEPIQGEGGVILPPPGYLTAVRKLCDEFGALMILDEVQTGMGRTGKM--FACEHENVQPDILCLAKALGGGVMPIGATIATEEVFSVLFDNPFLHTTTFGGNPLACAAALATINVLLEQNLPAQAEQKGDMLLDGFRQLAREYPDLVQEARGKGMLMAIEF--VDNEIGYNFASEMFRQRVLVAGTLNNAKTIRIEPPLTLTIEQCELVIKAARKALAAMRVSVEEA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4UOX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -67879 for 1997 contacts (-34.0/contact) +
2D Compatibility (PS) -32635 + (NN) -14563 + (LL) -4
1D Compatibility (HY) -16000 + (ID) 3500
Total energy: -134581.0 ( -67.39 by residue)
QMean score : 0.341
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