Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNR-------ANVHYI-EWLNEDKLPNLEDLPVDVCINLAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEEN---TY-ADNFLGKTVYEWEKTASAASDLGIRVVYARFGLVLGTNG-G-SFPVFEKLFQTYTGGRFGNGRQWYSWIHVDDVVAAILFIFDHEQINGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFIL-----GERAMTILDSQRAYPEKLM-SNHFEFRFETLQEALDDLLD |
| 2X4G Chain:A ((13-331)) | VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDHAG-LERALR--GLDGVIFS----------------EEVASALGQTNPFYAACLQA--RVPRILYVGSAYAMPRHPQGLPGHEGLFYDSLPSGKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDIGPTTGRVITAIGNGEMTHY--VAGQRNVIDAAEAGRGLLMALERGRIGERYLLTG-HNLEMADLTRRIAELLGQPAPQPMSMAMARALATLGRL----EVMAGGQFLDGRKAREELGFFSTT-ALDDTLLRAID |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X4G.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -169112 for 2272 contacts (-74.4/contact) +
2D Compatibility (PS) -29250 + (NN) -11144 + (LL) 820
1D Compatibility (HY) -3600 + (ID) 1950
Total energy: -214236.0 ( -94.29 by residue)
QMean score : 0.398
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