Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNPTFHADKPIYSQISDWMKKQMITGEWKGEDKLPSVREMGVQLAVNPNTVSRAYQELERAGYIYAKRGMGSFVTSDKALFDQLKIELADAITERFLEEAKSIGLDDQAAIELLIKRSRNHE
4U0Y Chain:D ((5-78))
-NINKQSPIPIYYQIMEQLKTQIKNGELQPDMPLPSEREYAEQFGISRMTVRQALSNLVNEGLLYRLKGRGTFVS-----------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
4U0Y.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -24640 for 484 contacts (-50.9/contact) +
2D Compatibility (PS) -7886 + (NN) -2316 + (LL) 4388
1D Compatibility (HY) -4800 + (ID) 1300
Total energy: -36554.0 ( -75.52 by residue)
QMean score : 0.636
(partial model without unconserved sides chains):
PDB file :
Tito_4U0Y.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4U0Y-query.scw
PDB file :
Tito_Scwrl_4U0Y.pdb
: