Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKFAVIQFPGS--NCDLDMLHAIRDSLG----EEAEYIWHAE-------------------TSLAGFDAVLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTEIGLLPGALIRNNNLH---------------------------FICK-TVPLRVANASTMFTELYEEGEIIQVPVAHGEGNYYCDDETLLKLKENNQIVFTYDSVNPNG-SRADIAGIVNERGN-VLGMMPHPERAVEEIIGGTDGLRLFESVVKAWKEEQVNA |
2V4U Chain:A ((299-553)) | CSIALVGKYTKLRDCYASVFKALEH-SALAINHKLNLMYIDSIDLEKITETEDPVKFHEAWQKLCKADGILVPGGFGIRGT---------LGKLQAISWARTKKIPFLGV-LGMQLAVIE--FARNCLNLKDADSTEFRPNAPVPLVIDMPEHNPGNLGGTMRLGIRRTVFKTE-NSILRKLYG--DVPFIEERHRHR-FEVNPNLIKQFEQNDLSFVGQD---VDGDRMEIIEL---ANHPYFVGVQFHPEFSSRP----MKPSPPYLGLLLAATGNLNA- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2V4U.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -106743 for 1626 contacts (-65.6/contact) +
2D Compatibility (PS) -21132 + (NN) -6148 + (LL) 1480
1D Compatibility (HY) -8800 + (ID) 1400
Total energy: -142743.0 ( -87.79 by residue)
QMean score : 0.428
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