Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIALPIDDPSVAVQA-ISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAALDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTSELAKHHP--------NKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESKKTMVK
1GPM Chain:A ((20-224))---------------------------TQLVARRVRELGVYCELWAWDVT--EAQIRDFNPSGIILSGGPEST---TEE-NS--------------PRAPQYVFEAGVPVFGVCYGMQTMAMQLGGHVEASNE--------------REFGYAQVEVVNDSALVRGIEDALTADGKPLLDVWMSHGDKVTAIPSDFITVASTESCPFAIMANE--EKRFYGVQFHPEVTHT--RQGMRMLERFVRDIC-----


General information:
TITO was launched using:
RESULT:

Template: 1GPM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -59576 for 1436 contacts (-41.5/contact) +
2D Compatibility (PS) -17936 + (NN) -3969 + (LL) 4708
1D Compatibility (HY) -6000 + (ID) 1850
Total energy: -84623.0 ( -58.93 by residue)
QMean score : 0.354

(partial model without unconserved sides chains):
PDB file : Tito_1GPM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1GPM-query.scw
PDB file : Tito_Scwrl_1GPM.pdb: