Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VLQTEMKVIQQTEIADKVYELILTGECVAGMSPGQFLMLKPSRSDLLMRRPISICSYDKTAKTCILLYRV--EGDGTRDFSKLSEGDTIDVL-GPLGKGFDIDTTPAPKTALLIGGGIGVPPMYQLGKELAEK--GVQVMFVNGFQSAKDSFYAQEMAEYG------------TVHI--ATVDGSLGTQGFVTD-IT-----KNF-----PEEPDVIYSCGPKAMLQAVKASFPETKTYLSLEERMACGIGACYACVCPKADDTNKQFKVCEDGPVFRADEVKL |
| 2QDX Chain:A ((3-234)) | --LYTERVLSVHHWNDTLFSFKTTRNPGLRFKTGQFVMIGLEVDGRPLMRAYSIASPNYE-EHLEFFSIKVPDGPLTSRLQHLKEGDELMVSRKPTGT-LVHDDLLPGKHLYLLSTGTGMAPFLSVIQDPETYERYEKVILVHGVRWVSELAYADFITKVLPEHEYFGDQVKEKLIYYPLVTREPFRNQGRQTDLMRSGKLFEDIGLPPMNPQDDRAMICGSPSMLEETSAVLDSF------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 2QDX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -98100 for 1555 contacts (-63.1/contact) +
2D Compatibility (PS) -21572 + (NN) -3376 + (LL) 3448
1D Compatibility (HY) -8800 + (ID) 2050
Total energy: -130450.0 ( -83.89 by residue)
QMean score : 0.458
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