Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | VTFERLGTMNVNAEGHLEIGGVDTLKLADKYGTPLYVYDVALIRDRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELFTAIKANFP----PERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKASVLIRVTPGIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFETTGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLE---PSEYVRQIMDEVRDVAESNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRPALYDAHYDAVLAANP----EKVAEETVAIAGKCCESGDMLIWD-------LPLPKSNAGEVLAVFCTGAYGYAMASNYNRIPRPPVVFVENGVDKLIVARETYENLVQNDLSL |
| 1KNW Chain:A ((12-419)) | ------------------LTAENLLRLPAEFGCPVWVYDAQIIRRQIAALKQ-F----D--VVRFAQKACSNIHILRLMREQGVKVDSVSLGEIERALAAGYNPQTHPDDIVFTADVIDQATLERVSELQI-PVNAGSVDMLDQLGQVS----PGHRVWLRVNPGFGHGHSQKTNTGGENSKHGIWYT--DLPAALDVI--QRHHLQLVGIHMHIGSGVD-YAHLEQVCGAMVR---QV-IEFGQDLQAISAGGGLSVPYQQGEEAVDTEHYYGLWNAAREQIARHL----GHPVKLEIEPGRFLVAQSGVLITQVRSVKQM-GSRHFVLVDAGFNDLMRPAMYGSYHHISALAADGRSLEHAPTVETVVAGPLCESGDVFTQQEGGNVETRALPEVKAGDYLVLHDTGAYGASMSSNYNSRPLLPEVLFDNGQARLIRRRQTIEELLALEL-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KNW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -246536 for 3362 contacts (-73.3/contact) +
2D Compatibility (PS) -41858 + (NN) -15797 + (LL) 2380
1D Compatibility (HY) -22000 + (ID) 5850
Total energy: -329661.0 ( -98.06 by residue)
QMean score : 0.526
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