Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGIFIIIAVKLLSGFFGLQTVEWITDQMLTWGFLAI-IIIFQPELRRALETL-GRG------NIFTRYGSRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTG-MDDYIETGIPLNAKISSQLLINIFIPNTPLHDGAVI-IKGN-EIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSITIVVSEETGGISLTKGG-ELFRDVSEEELHKILLKELVTVTAKKPSIFSKWKGGKSE |
| 3GF6 Chain:A ((4-222)) | ------DAIYYPVGDVDI-------------ERGGPALEVGEEDVLVARSFNEEDYVLDTIAQYPNDP--TLGKLTFMIDLKNQQKDQNVADFNGVGKSKLTMSLGYKDGNYPSESQVPIYTSQDVTAKYAVKLRLKGELLVSGDEWMID-YVYAQLA-----------SLFQPYPPANFPEVFMCKGGMKLGTFDSF--------------------------RRTCTFDITYDRSDLSFSQLYFNLFINLAGQKR-----ENRVRLRIDKESYFELYEQSE-- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 3GF6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -75705 for 1577 contacts (-48.0/contact) +
2D Compatibility (PS) -21200 + (NN) 2208 + (LL) 6172
1D Compatibility (HY) -8800 + (ID) 1950
Total energy: -99275.0 ( -62.95 by residue)
QMean score : 0.059
|
|
|