Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------MKKIPFIIQYVKST--LGPTA---IFEGRKVLKFWQMVIVFIFLNALLLLPVSAHFA-NQSSFDLPSLMPKMATLGTDQLASKI------------------------------------SGLTLENGALTDKNAHIVEKTVNGVAGVNLTKAELSGAKNVINFKDQEMTLTDAS------------GYNFEVSYPKDATLSEITSGESLVDWVSA------------QWYLENQAFVFLSMVLMIGSIIFV---------SSLMLTVFTTLFIWMTKRSSFSSIASFKESVNLTLNALGIPVIAACIIGFIYFDITI----------IMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAASR |
| 4BWZ Chain:A ((3-386)) | GAEHLLEIFYLLLAAQVCAFIFKRLNQPVVIGEVLAGVLVGPALLGLVHEGEILEFLAELGAVFLLFMVGLETRLKDILAVGKEAFLVAVLGVALPFLGGYLYGLEIGFETLPALFLGTALVATSVGITARVLQELGVLSRPYSRIILGAAVIDDVLGLIVLACVNGVAETGQVEVGAITRLIVLSVVFVGLAVFLSTLIARLPLERLPVGSPLGFALALGVGMAALAASIGLAPIVGAFLGGMLLSEVREKYRLEEPIFAIESFLAPIFFAMVGVRLELSALASPVVLVAGTVVTVIAILGKVLGGFLGALTQGVRSALTVGCGMAPRGEVGLIVAALGLKAGAVNEEEYAIVLFMVVFTTLFAPFALKPLIAWTERERAAKE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4BWZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -135369 for 2082 contacts (-65.0/contact) +
2D Compatibility (PS) -27883 + (NN) -1247 + (LL) 100
1D Compatibility (HY) -14000 + (ID) 2350
Total energy: -180749.0 ( -86.82 by residue)
QMean score : 0.088
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