Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MTKKVGLLVMAYGTPYKDEDIERYYTDIRHGHKPSEEMIADLRGRYHAIGGLSPLAKITEAQAYGLEKALND-SQDEVEFKAYIGLKHIEPFIEDAVEAMHKDGIEEAISIVLAPHYSSFSVEA--------YNKRAKEAADKLGGPRINAINDWYKQPKFIQMWADRINETAKQIPADELLDTVLIVSAHSLPEKIKQHNDPYPNQLQETADFIFEKV-VVPHYALGWQSEGKTGE-PWLGPDVQDLTRELYGREKYKHFIYTPVGFVAEHLEVLYDNDYE-CKVVTDEVGA-AYHRPPMPNSDPEFLEVLRTVVWEKYSN |
2QD2 Chain:A ((58-321)) | --------------------------------------------QYRRIGGGSPIKIWTSKQGEGMVKLLDELSPNTAPHKYYIGFRYVHPLTEEAIEEMERDGLERAIAFTQYPQYSCSTTGSSLNAIYRYYNQVGRKPTMKW-----STIDRWPTHHLLIQCFADHILKELDHFPLEKRSEVVILFSAHSLPMSVVNRGDPYPQEVSATVQKVMERLEYCNPYRLVWQS--KVGPMPWLGPQTDESIKGLCERGR-KNILLVPIAFTSDHIETLYELDIEYSQVLAKECGVENIRRAESLNGNPLFSKALADLV------ |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2QD2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -85569 for 1873 contacts (-45.7/contact) +
2D Compatibility (PS) -26729 + (NN) -11810 + (LL) 2872
1D Compatibility (HY) -17200 + (ID) 4250
Total energy: -142686.0 ( -76.18 by residue)
QMean score : 0.456
|
|
|