Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LTKTLQDRMILPGNGTIPYIGLGVFQVTEQEFIAGAVEKAIEVGYRLFDTAAVYNNEAIVGQAIASSAVSREELFISSKVWNGDLGYDETLFAFERTLRNLKLDYLDLYLIHWPVA--GKYRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLLVAANEKPVLNQVETHPLLPQNDLRKYLVEQNIAHAAWSPLAKGILMQNPVITEIAKKHQASVDQVILQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDASDMEKIDRLE-TGKRVGPDPDDLEYFLSSIERERAYLASENEE |
| 3WBW Chain:B ((24-282)) | ---------------TMPQIGLGVWETPPDE-TAEVVKEAVKLGYRSVDTARLYKNEEGVGKGLEDHP----EIFLTTKLWNDEQGYDSTLRAYEESARLLRRPVLDLYLIHWPMPAQGQYVETWKALVELKKSGRVKSIGVSNFESEHLERIMDATGVVPVVNQIELHPDFQQRALREFHEKHNIRTESWRPLGKGRVLSDERIGKIAEKHSRTPAQVVIRWHLQNGLIVIPKSVNPKRLAENLDVFGFVLDADDMQAIEQMDRKDGRMGADPNTAKF------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3WBW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -137268 for 2162 contacts (-63.5/contact) +
2D Compatibility (PS) -27113 + (NN) -10249 + (LL) 2812
1D Compatibility (HY) -21600 + (ID) 5250
Total energy: -198668.0 ( -91.89 by residue)
QMean score : 0.480
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