Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKYGILALALTAALTLSACGGKEEPE----AANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRL---PGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVD-FQNKTSAIKEKVVGDVLSNAKVY-FMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY |
| 2YJP Chain:A ((45-279)) | ----------------------------AATVAAIKEKGVIRIGVFGDKPPFGYVDANGKNQGFDVEIAKDLAKDLLGSP-DKVEFVLTEAANRVEYVRSGKVDLILANFTQTPERAEAVDFADPYMKVALGVVSPKN--KPITDMAQLKDQTLLVNKGTTADAFFTKSHPE-----VKLLKFDQNTETFDALKDGRGVALAHDNALLWAWAKENPNF--EVAIGNLGPAEFIAPAVQKGNADLLNWVNGEIAAMKKDGRLKAAYEKTLLPVY----- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2YJP.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -60846 for 1858 contacts (-32.7/contact) +
2D Compatibility (PS) -23995 + (NN) -6787 + (LL) 2308
1D Compatibility (HY) -6800 + (ID) 2600
Total energy: -98720.0 ( -53.13 by residue)
QMean score : 0.482
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