Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHHETTWLHEAAAGTIEPEKLMYPLDKVVNDTKTT-FIQDTVVKINKDEKTVTLDA-----NGDISYDYLLIALGSEAETFGISGLK-EYAFTITSVESVKKIRAHIEAQFAKWKTDPRDELLTIIVGGAGFTGIEFLGELTNRIPELVKQYDVPREKVRIYCMEAAPKVLPQF-DAKLVDYGVGVLEDRGVEFHVGKPVKEATADGV----KYAESENEVREIKAATIIWAAGVRGNSVIE-ASGFE-AGRGRVKVNNNLTVPGNEEILIVGDCSLIINPANDR-PFPPTAQIAMQQADVAAVNLAKLVKGETDLQDFVYHEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGVLASKGKFKFYK |
| 3IWA Chain:A ((4-348)) | ---KHVVVIGAVALGPKAACRFKRLDPEAHVTMIDQA----------------------------------VEALVETRAHAIDRAAHTVEIENLRTGERRTLKYDKLVLALGSKANRPPVEGMDLAGVTPVTNLDEAEFVQHAISA----------GEVSKAVIVGGGFIGLEMAVSLADMW------------GIDTTVVELADQIMPGFTSKSLSQMLRHDLEKNDVVVHTGEKVVRLE-GENGKVARVITD--K-RTLDADLVILAAGVSPNTQLARDAGLELDPRGAIIVDTRMRT-SDPDIFAGGDCVTIPNLVTGKPGFFPLGSMANRQGRVIGTNLADG----------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3IWA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158526 for 2209 contacts (-71.8/contact) +
2D Compatibility (PS) -28865 + (NN) -7908 + (LL) 7804
1D Compatibility (HY) -13200 + (ID) 3350
Total energy: -204045.0 ( -92.37 by residue)
QMean score : 0.594
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