Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -----------------------------------------------MLDHYLTIHSDGKHEII----IEKSRFICHIKRATTETEAQTFIQEIKKE----HRDATHNCSAYIIGENDQYQKAHDDG---EPSGTAGFPMLEILKK-KSLKNVAVVVTRYFGGTKLGAGGLVRAYGSAVSEAIQAIGIVECKLATIVECSFAYPLLGKVENALELKAYQIDKKEFTEKVVLHIFVDNDELQDFFN----WITEISNGQLEYKEGPQKYREKDVT---------------------------------------- |
| 1NVM Chain:B ((1-312)) | MNQKLKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTTYAGVEGLIKLPEFADIDFVFDATSASAHVQNEALLRQAKPGIRLIDLTPAAIGPYCVPVVNLEEHLGKLNVNMVTCGGQATIPMVAAVSRVAKVHYAEIVASISSKSAGPGTRANIDEFTETTSKAIEVIGGAA-KGKAIIIMNPAEPPL-IMRDTVYVLSAAADQAAVAASVAEMVQAVQAYVPGYRLKQQVQFDVIPESAPLNIPGLGRFSGLKTSVFLEVEGAAHYLPAYAGNLDIMTSAALATAERMAQSMLNA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NVM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19141 for 1499 contacts (-12.8/contact) +
2D Compatibility (PS) -22202 + (NN) -2279 + (LL) -116
1D Compatibility (HY) -1200 + (ID) 1350
Total energy: -46288.0 ( -30.88 by residue)
QMean score : 0.247
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