Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMANVHVINHPLVQHKLTIIRDKNTGTKAFRELVDEVATLMAYEITRDMELEDIQVETPLQTTTAKTLTGKKLGIVPILRAGLGMQDGILKLIPAAKVGHVGLYRDHDTLEPVEYFVKLPSDVEERLFIVVDPMLATGGSAIMAIDCLKKRGARNMK--FMCLVAAPEGVKALQDAHPDVEIYVAGLDEKLDENGYIRPGLGDAGDRLFGTK
1BD4 Chain:A ((48-242))---------------MTIIRDKETPKEEFVFYADRLIRLLIEEALNELPFQKKEVTTPLDVSYHGVSFYSKICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTAEPKLIYEKLPADIRERWVMLLDPMCATAGSVCKAIEVLLRLGVKEERIIFVNILAAPQGIERVFKEYPKVRMVTAAVDICLNSRYYIVPGIGDFGDRYFGT-


General information:
TITO was launched using:
RESULT:

Template: 1BD4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139715 for 1445 contacts (-96.7/contact) +
2D Compatibility (PS) -20722 + (NN) -5292 + (LL) 1388
1D Compatibility (HY) -15200 + (ID) 3400
Total energy: -182941.0 ( -126.60 by residue)
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_1BD4.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1BD4-query.scw
PDB file : Tito_Scwrl_1BD4.pdb: