Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VAESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGSGKSTIAKLLNGLLFPEDGLIKI-GH-FVLSEKNIWEIRRQVGMVFQNPDNQFVGATVQDDVAFGLENHGVPHDTMVERVE--------SALNEVGMQSYALHEPARLSGGQKQRVAIAGVLALQPDVIILDEATSMLDPRGRAEVMETI-RIMREQEDITVISITHDLDEVLFADRVIVMNKGEIHSEGTPKEIFQQADAMREIGLGVPFIIELQEKLVAGGFETGSTVLSEGALLDQLWKLNSNN |
2FF7 Chain:A ((8-237)) | -----ITFRNIRFRYKPDSPVILDNINLSIKQGEVIGIVGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPN-W-LRRQVGVVLQ--DNVLLNRSIIDNIS--LANPGMSVEKVIYAAKLAGAHDFISELRE-GYNTIVGEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMRNMHKICKGR---TVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESL--------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FF7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -124236 for 1625 contacts (-76.5/contact) +
2D Compatibility (PS) -22995 + (NN) -200 + (LL) 3840
1D Compatibility (HY) -22800 + (ID) 4100
Total energy: -170491.0 ( -104.92 by residue)
QMean score : 0.521
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