Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MAKPYGVVIISHSKDVAKGVHDIIKEIAPDV-SITHAGGTEDGRIGTS----FDAVNEAIEN--NEANKVYTFYDL--GSAKMNIETVEEISEKEIILFNAPILEGAYATAAQVQMDEKPEVIAANLKTIEIK
3LFH Chain:A ((2-84))
--KEKFVLIITHG-DFGKGLLSGAEVIIGKQENVHTVG----LNLGDNIEVVRKEVEKIIKEKLQEDKEIIIVVDLFGGSPFNIALSMMK-------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3LFH.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -27325 for 457 contacts (-59.8/contact) +
2D Compatibility (PS) -8056 + (NN) -4082 + (LL) 4612
1D Compatibility (HY) -4000 + (ID) 900
Total energy: -39751.0 ( -86.98 by residue)
QMean score : 0.486
(partial model without unconserved sides chains):
PDB file :
Tito_3LFH.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3LFH-query.scw
PDB file :
Tito_Scwrl_3LFH.pdb
: