Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRNELEDKILAILEQHQVGVLTSVQGDYPHARYMTFLHDGLTLYTPSGKELPKTDEVRRNPHVSVLIGYESP------------GSAFLEINGLASLEEDESIKERIWENISKEWFRG----------EDSPSFVVIKIVPEQIRILNSDDDGPDTLDLIG
2FUR Chain:A ((20-170))
---YSDEDLVAMLDRNFTCTVSFIDGGIPYAIPMMLASEGKTIYLHGSMKSRIYGILKTGQLIAISLLEINGIVLAKEIKNNSINYVSALIFGRPYEIDDTEKKIEVFRLLTEKLVKGRWDNSIKPSYEDLNGVFVFAVKPETFSMKARTGPPH-------
General information:
TITO was launched using:
RESULT:
Template:
2FUR.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55976 for 861 contacts (-65.0/contact) +
2D Compatibility (PS) -13932 + (NN) -3350 + (LL) 512
1D Compatibility (HY) -4800 + (ID) 950
Total energy: -78496.0 ( -91.17 by residue)
QMean score : 0.434
(partial model without unconserved sides chains):
PDB file :
Tito_2FUR.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FUR-query.scw
PDB file :
Tito_Scwrl_2FUR.pdb
: