Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRGYYDEISFDVNTTAKKMHLFLLRSIA-SYDVTPEQWSVLEGIEANEPISQKEIALWTKKDTPTVNRIVDVLLRKELIVREISTEDRRISLLSLTEKGRKETNELRDIVEVSCEKMFAGVERADLEQFTAILKNISTNIE
2FA5 Chain:A ((17-154))
--NLEQFLPYRLSVLSNRISGNIAKVYGDRYGMAIPEWRVITILALYPGSSASEVSDRTAMDKVAVSRAVARLLERGFIR---------RSMLALSPAGRQVYETVAPLVNEMEQRLMSVFSAEEQQTLERLIDRLAKDG-
General information:
TITO was launched using:
RESULT:
Template:
2FA5.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -52303 for 830 contacts (-63.0/contact) +
2D Compatibility (PS) -13556 + (NN) -4114 + (LL) 1072
1D Compatibility (HY) -7200 + (ID) 950
Total energy: -77051.0 ( -92.83 by residue)
QMean score : 0.482
(partial model without unconserved sides chains):
PDB file :
Tito_2FA5.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FA5-query.scw
PDB file :
Tito_Scwrl_2FA5.pdb
: