Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -MTLYIIANPHAGNKNASTIVG-KIQELYHTE-DISVFYTEQKDDEKKQVINILRSFKESDHLMIIGGDGTLSKVMTYL-----PQHIPCAYYPVGSGNDFARALKIP-NLKETLTAIQTERLKEIN-CFIYDKGLILNS-LDLGFAAYVVWKASNSKIKNILNRYRLGKITYIVIAI-K-SLLHSSKVQVLVEGETGQQIKLNDLYFFALANNTYFGGGITIWPKASALTAELDMVYAKGHTFLKRLSILLSLVFKRHTTSKSIKHQTFKAMTVYFPKNSLIEIDGEIVELDQISLKCQKRYLYM---------- |
| 2JGR Chain:A ((4-299)) | FPASLLILNGKSTDNLPLREAIMLLR---EEGMTIHVRVTWEKGDAARYVEEARK--FGVATVIAGGGDGTINEVSTALIQCEGDDIPALGILPLGTANDFATSVGIPEALDKALKLAIAGDAIAIDMAQVNKQ-TCFINMATGGFGTIH--------------------------GLMRMDTLQPDRCEIRGENFHWQ----GDALVIGIGNGRQAGGGQQLCPNALINDGLLQLRIFTG-------------------DNPNIIEGASSWFDIQAPHDITFNLDGEPLSGQNFHIEILPAALRCRLPPDCPLLR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2JGR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -181668 for 1969 contacts (-92.3/contact) +
2D Compatibility (PS) -25696 + (NN) -4043 + (LL) 5152
1D Compatibility (HY) -5200 + (ID) 2350
Total energy: -213805.0 ( -108.59 by residue)
QMean score : 0.487
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