Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MLENDIKKVLYSEEDIILKTKELGAKLTADYAGKNPLLVGVLKGSVPFMAELLKHIDTHVEIDFMVVSSYHGGTTSSGEVKILKDVDTNIEGRDVIFIEDIIDTGRTLKYLRDMFKYRQANSVKVATLFDKPEGRLVDIDADYVCYDIPNEFIVGFGLDYAENYRNLPYVG-VLKEEIYSK
4QYI Chain:C ((7-176))
----EIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQTETTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERRKVDLTAEYVGFQIPDEFIVGYGIDCAEKYRNLPFIASVV-------
General information:
TITO was launched using:
RESULT:
Template:
4QYI.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -122012 for 1301 contacts (-93.8/contact) +
2D Compatibility (PS) -18542 + (NN) -6233 + (LL) 1012
1D Compatibility (HY) -20400 + (ID) 4150
Total energy: -170325.0 ( -130.92 by residue)
QMean score : 0.579
(partial model without unconserved sides chains):
PDB file :
Tito_4QYI.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4QYI-query.scw
PDB file :
Tito_Scwrl_4QYI.pdb
: