Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKTPIISIIMGSKSDWGTMQKTAEVLDNFGIAYEKKVVSAHRAPDLMFKHAEEARGRGIKIIIAGAGGAAHLPGMVAAKTTLPVIGVPVKTRALSGLDSLYSIVQMPGGVPVATMAIGEAGATNAALTALRILSIEDQNLADALAHFHEEQGKIAEESSNELI
2FWP Chain:B ((23-143))
---PVVGIIMGSQSDWETMRHADALLTELEIPHETLIVSANRTPDRLADYARTAAERGLNVIIAGAGGAAHLPGMCAAWTRLPVLGVPVESRALKGMDSLLSIVQMPGGVPVGTLAIGASGAKNAALLAASILALYNPALAARLETWRALQTASVPNSPITE-
General information:
TITO was launched using:
RESULT:
Template:
2FWP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -82178 for 1028 contacts (-79.9/contact) +
2D Compatibility (PS) -13069 + (NN) -4951 + (LL) 468
1D Compatibility (HY) -13600 + (ID) 3650
Total energy: -116980.0 ( -113.79 by residue)
QMean score : 0.523
(partial model without unconserved sides chains):
PDB file :
Tito_2FWP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2FWP-query.scw
PDB file :
Tito_Scwrl_2FWP.pdb
: