Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRDFEELFDKVKPIVMKLRRNYFVQLWEYDDWIQEGRIVLFRLLEEHPYLLDNESKLFIYFKTKFSNYLNDVLRHQDCQKRQFNKMPYEEISEVSHYVKSKGLVLDDYIAYRDTLTKVEETLSDIDKEKFEKLISGERFAGKKQFIRDIQPFFNAFKAD
1SIG Chain:A ((374-446))
-RAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEY--RRGYKFSTYATWWIRQAITRSIADQ-----------------------------------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1SIG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -43360 for 496 contacts (-87.4/contact) +
2D Compatibility (PS) -7525 + (NN) -2634 + (LL) 6476
1D Compatibility (HY) -3600 + (ID) 750
Total energy: -51393.0 ( -103.61 by residue)
QMean score : 0.489
(partial model without unconserved sides chains):
PDB file :
Tito_1SIG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1SIG-query.scw
PDB file :
Tito_Scwrl_1SIG.pdb
: