Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAVFNKLFKRRHSVSEEIKKDDLQEEVEATETEETVEEVIEEIPEKSELELANERADEFENKYLRAHAEMQNIQRRSSEERQQLQRYRSQDLAKAILPSLDNLERALAVEGLTDDVKKGLEMTRDSLIQALKEEGVEEVEV--DSFDHNFHMAVQTLPADDEHPADSIAEVFQKGYKLHERLLRPAMVVVYN--- |
| 1DKG Chain:A ((139-197)) | ---------------------------------------------------------------------------------------------------------------------------------------VEVIAETNVPLDPNVHQAIAMVESDDVAP-GNVLGIMQKGYTLNGRTIRAAMVTVAKAKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1DKG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -17190 for 347 contacts (-49.5/contact) +
2D Compatibility (PS) -5363 + (NN) 661 + (LL) 11864
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -15028.0 ( -43.31 by residue)
QMean score : 0.411
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