Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTLLDSYKLKQDFPILNQLVNDEPLIYLDNAATTQKPNQVLETLRAYYQNDNANVHRGVHTLAERATAQYETAREKARQFLNAKSSKEILFTRGTTTGLNWVAK-FAESILERGDEVLISIMEHHSNIIPWQQACERTGAKLVYAYL-KDGSLDLEDFYNKLSSKTKFVSLAHISNVLGCITPVKAIAERVHQVG--AYMVVDGAQSAPHMAIDVQDLDCDFFALSGHKMLGPTGIGVLYGKESILDKMPPVEFGGEMIDFVYEQSATWKELPWKFEAGTPNIAGAIAFGEALDYLTDVGMDEIHQYEQSLVSYVLPKLQAIDGLTIYGPSDAESHVGVIAFNLEGLHPHDVATAMDYEGVAVRAGHHCAQPLINHLGIHSAVRASFYFYNTKEDCDKLVDAIQKTKEFFNGTL |
| 1ECX Chain:A ((1-376)) | MR-----------------------VYFDNNATTRVDDRVLEEMIVFYREKYGNPNS-AHGMGIEANLHMEKAREKVAKVLGVS-PSEIFFTSCATESINWILKTVAETFEKRKRTIITTPIEHKAVLETMKYLSMK-GFKVKYVPVDSRGVVKLEELEKLVDEDTFLVSIMAANNEVGTIQPVEDVTRIVKKKNKETLVHVDAVQTIGKIPFSLEKLEVDYASFSAHKFHGPKGVGITYIRKGV--PIRPLIHGGGQ--------------ERGLRSGTQNVPGIVGAARAMEIAVE-ELSEAAKHMEKLRSKLVSGLMNLG--AHIITPLEISLPNTLSVSFPNIRGSTLQNLLSGYGIYVSTHVLDAMGVDRRIA-QGAIRISLCKYNTEEEVDYFLKKIEEILSFL---- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ECX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -194634 for 3151 contacts (-61.8/contact) +
2D Compatibility (PS) -38993 + (NN) -11644 + (LL) 3216
1D Compatibility (HY) -22400 + (ID) 4350
Total energy: -268805.0 ( -85.31 by residue)
QMean score : 0.527
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