Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MVQSYSKNANHNMRRPVVKEEIVQYMRQHQKQNNGCLAELEAFAKQENIPIIPHETATYFRFLMQTLQPKHILEIGTAIGFSALLMAENAP-EAKITTIDRNEEMIVLAKENFAKYDNHNQITLLEGDAVDVLQTLDKSYDFVFMDSAKSKYIVFLPQVLKHLDVGGVVVLDDIFQGGDIAKPIDEVRRGQRTIYRGLQRLFDSTLRHPDLTATLVPLGDGLLMIRKNAEHIVLED
3C3P Chain:A ((6-210))
-----------------VDSRIGAYLDGLLPEADPVVAAMEQIARERNIPIVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAG-QRDIDILFMDCDVFNGADVLERMNRCLAKNALLIAVNALRRG------------------ALREFNHHLSRRRDFFTTIVPVGNGVLLGYRLS-------
General information:
TITO was launched using:
RESULT:
Template:
3C3P.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -128935 for 1587 contacts (-81.2/contact) +
2D Compatibility (PS) -21669 + (NN) -15268 + (LL) 3268
1D Compatibility (HY) -12800 + (ID) 1900
Total energy: -177304.0 ( -111.72 by residue)
QMean score : 0.692
(partial model without unconserved sides chains):
PDB file :
Tito_3C3P.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3C3P-query.scw
PDB file :
Tito_Scwrl_3C3P.pdb
: