Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKQFLKSAAILSLAVTAVSTSQPVAGITKDYNN---RNEKVKKYLQENNFGHKIAYGWKNKVEFDFRYLLDTAKYLVNKEEFQDPLYNDAREELISFIFPYEKFLINNRDITKLTVNQYEAIVNRMSVALQKFSKNIFEKQKVN-KDLIPIAFWIEKSYRTVGTNEIA-ASVGIQGG--FYQNFHDYYN-----YSYLLNSLWHE----GNVKEV-----VKDYENTIRQILSKKHEIEKIL-----------NQSTSDISIDDDDYEKGNKELL----REKLNIILNLSKRDYRVTPYYEVNKLHTGLIL---------------LEDVPNLKIAKDKLFSLENSLKEYKGEKVNY---EELRFNTEPLTSYLENKEKFLVPNI-PYKNKLILREEDKYSFEDDEEEFGNELLSYNKLKNEVLPVNITTSTILKPFEQKKIVEDFNPYSNLDNLEIKKIRLNGSQKQKVEQEKTKSPTPQKETVKEQTEQKVSGNTQEVEKKSETVATSQQSSVAQTSVQQPAPVQSVVQESKASQEEINAAHDAISAYKSTVNIANTAGVTTAEMTTLINTQTSNLSDVEKALGNNKVNNGAVNVLREDTARLENMIWNRAYQAIEEFNVARNTYNNQIKTETVPVDNDIEAILAGSQAKISHLDNRIGARHMDQAFVASLLEVTEMSKSISSRIKE |
| 5AWO Chain:A ((15-610)) | ----PVTAAPPLRLASR--NSVFTRSGAGPRYWNIYGYSFPHNAPIPENEWKVNIDWLAGNFADFGYDIAC-TDGWIEGSSRTTGNGYITSYNDSWQHDWAYWANYLAARKM-KLGVYYNPLWVHRAAV--EDASKTVLGRPDVKIADLVVPGDFFA---RDIGGNQLYWLDVTKSGAKEYVQGYVRYFKDLGVPYLRIDFLSWYEDGRDANIGQVNAPHGRANYELALSWINEAAGEDMEVSLVPHMFQDGSAELANGDLVRINADADKGGWDRLSGMRQNWQDAWPNWANPFCGFTGWSHRNGRGQ-LILDGDFMRASTFASDEERKTMMNLMVAAGSPLAIADTYQQIGNNAWVYTNKEVLQLNADGLVG------KPLYRSATPFSKDPGSRDTERWAGQLPDGSWGVALFNRSDTETVTKTIDFAKDLGLAT---GGNVRDLWEHRNLG----------------MDSRATAALAPHASAIFRVTPPKMHGTTRYP-----AAFAAWGGGAGFNYNHPGYDGNGFVDGLQAGSGS----ADPLVTFAVQVPHRGSYAIRYRYANATGDTSTMTVTAEKA---DRSTVDGPVHVSFPGLATWDT--W-------------------GVADGTITLDAGLNLVTIGRGAT----DKG--------AINLNWIELDM----------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 5AWO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 170406 for 4648 contacts (36.7/contact) +
2D Compatibility (PS) -54515 + (NN) 9453 + (LL) 7368
1D Compatibility (HY) -16000 + (ID) 4850
Total energy: 111862.0 ( 24.07 by residue)
QMean score : 0.054
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