Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSQSYINVIGAGLAGSEAAYQIAKRGIPVKLYEMRGVKSTPQHKTDNFAELVCSNSFRGDSLTNAVGLLKEEMRRLDSIIMRNGEAHRV----------PAG--GAMAVDREGYSEAVTEEIHKHPLIEVIRD------------------EITDIPGDAITVIATGPLTSD-------SLAAKIHELNGGDGFYFYDAAAPIVDKNTIDMNKVYLKSRYDKG-EAAYLNCPMT-KEEFMAFHEALTTAEEAPLNSFEKEKYFEGCMPIEVMAKRGIKTMLYGPMKPVGLEYPEDYKGPR---DGEFKTPYAVVQLRQDNAAGSLYNIVGFQTHLKWGEQKRVFQMIPGLENAEFVRYGVMHRNSYMDSPNLLDQTFATRKNPNLFFAGQMTGVEGYVESAASGLVAGINAARRFNGESEVVF-PQTTAIGALPHYITHT-D----------------------SKHFQPMNVNFGIIKELEGPRIRDKKERYEAIATRALKDLEKFLNY |
| 3CES Chain:A ((5-477)) | -DPFDVIIIGGGHAGTEAAMAAARMGQQTLLLTHNID---------TLGQMSCNPAIGGI----GKGHLVKEVDALGGLMAKAIDQAGIQFRILNASKGPAVRATRAQADRVLYRQAVRTALENQPNLMIFQQAVEDLIVENDRVVGAVTQMGLKFR-AKAVVLTVGTFLDGKIHIGSIPLSRRLRE-LPLRVGRLKTGTPPRIDARTIDFSVLAQQHGDNPMPVFSFMGNASQHPQQV-PCYITHTNEKT---H----DVI--------------RSNLDRS-------------PSIEDKVMRFADRNQHQIFLEPEGLTSNEIYPNGISTSLPFDVQMQIVRSMQGMENAKIVRPGYAIEYDFFD-PRDLKPTLESKFIQGLFFAGQINGTTGYEEAAAQGLLAGLNAARLSADKEGWAPARSQAYLGVLVDDLCTLGTKEPYRMFTSRAEYRLMLREDNADLRLTEIGRELGLVDDERWARFNEKLENIERERQRLKSTWVTPSAE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CES.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107917 for 3272 contacts (-33.0/contact) +
2D Compatibility (PS) -40387 + (NN) -7486 + (LL) 2512
1D Compatibility (HY) -10800 + (ID) 3900
Total energy: -167978.0 ( -51.34 by residue)
QMean score : 0.332
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