Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MNIYDQLQAVEDRYEELGELLSDPDVVSDTKRFMELSREEANTRE--TVTAY-REYKQVIQNISDAEEMIK------DASGDAELEEMAKEELKESKAAKEEYEERLKILLLPKDPNDDKNIILEIRGAAGGDEAALFAGDLLTMYQKYAETQGWRFEVMESSVNGVGGIKEVVAMVSGQSVYSKLKYESGAHRVQRVPVTESQGRVHTSTATVLVMPEVEEVEYEIDQKDLRVDIYHASGAGGQNVNKVATAVRMVHIPTGIKVEMQEERTQQKNRDKAMKIIRARVADHFAQIAQDEQDAERKSTVGTGDRSERIRTYNFPQNRVTDHRIGLTLQKLDTILSGKMDEVI--DALVMYDQTQKL--EALNK |
| 4Q3K Chain:A ((20-260)) | -------------------------------QGMNISKITINQHVGVTLTCYVQDVSQEMSNMSKRPAMLIFPGGGYQFCSDREAEPIALSYLAKG----------YNAFVLRYSVKEH----------AVFPRPLIDAEDALSYLKDNAHALHINPDKIAVIGFSAGGHLATTLATEGKVRPN---------------------------AVVLGYPALIRHEKYWNFPTPKVD-------------QQTPEMFVFHTFEDDLVPL----------------------SHPLYIVEELSKA------------------NIPVEFHLFKSGVHGLSLGNKIVSNGLDKMIEDDVQVWFDLSCRWLDKVLDL |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Q3K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -21945 for 1868 contacts (-11.7/contact) +
2D Compatibility (PS) -24050 + (NN) -4399 + (LL) 9140
1D Compatibility (HY) -5600 + (ID) 2350
Total energy: -49204.0 ( -26.34 by residue)
QMean score : 0.380
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