Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
M-SRKVRRHFTDDFKQQIVDLYNVGRKRSSLIKVYELTPSTFDKWVRQAKTTGSFKSVDNLTDEQRELIELRKHNKELEMQLDILKQAAVIMAQKGK
2HIN Chain:A ((1-66))
MKPEELVRHFGD---------------VEKAAVGVGVTPGAVYQWLQA----------GEIPPLRQSDIEVRTAYK---LKSDFTSQR---MGKEGH
General information:
TITO was launched using:
RESULT:
Template:
2HIN.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -2774 for 431 contacts (-6.4/contact) +
2D Compatibility (PS) -6785 + (NN) -1481 + (LL) 2448
1D Compatibility (HY) -3200 + (ID) 800
Total energy: -12592.0 ( -29.22 by residue)
QMean score : 0.477
(partial model without unconserved sides chains):
PDB file :
Tito_2HIN.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2HIN-query.scw
PDB file :
Tito_Scwrl_2HIN.pdb
: