Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ---------------------MLNKMKARFLIGLGGF--AVISFIIMIGYTIGSQSVTKQTEHQIQSEAKRLAVKEKQKEKENILSDQLVKEFLTQY------YTKEKLGENNHRIKPYMTDSAYS------EEVAHQEESINQVYKDYLLDYRFEKAETFVNTETNEALAEV-SYQVTYVSDASGNQQKSTQTETKTVKLA------YSKLSNKLLVNQITIWNGKLESLKENKTGSNSAIPNIQGTTTMETN---- |
3P0K Chain:A ((2-259)) | GIPLTPLFSRYKDSYLLYSFRLIDLLRASKSTHLTKLLSSQATYLYHFACLMKYKDIQKYEVQQLIEWAINASPDMDLQQFRIEFMDKTTELNLRSCQPKSFTYTFTTIWDTMHFLSLIIDDMVYTRDKSSLDFVMQQLKTMKVLFYNVFFILQCAMCRDHYMNVKGFIIYHIELIEIALDKEKYGTDITFVDSYQQETAGADVAVVSNNMLMKNLMAYVSMTFHNHINDYKWIQRNKKPPAHYERMTWGEYKKLLNL |
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General information:
TITO was launched using:
| RESULT:
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Template: 3P0K.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 20002 for 1403 contacts (14.3/contact) +
2D Compatibility (PS) -21872 + (NN) -1964 + (LL) 0
1D Compatibility (HY) -8000 + (ID) 1000
Total energy: -12834.0 ( -9.15 by residue)
QMean score : 0.268
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