Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTNTVTPKETAGSFINKVLGGTATAIVVALIPNAILATFLKPFLSYGLAAEFLHIVQVFQFFTPIMAGFLIGQQFKFTPMQQLAVGGAAYIGSGAWAYTEVIQKGVATGSFQLRGIGDLINMMLTAALAVLAVKWFGNKFGSLTIILLPIIIGTGVGYLGWKLLPYVSYVTTLIGQGINSFTTLQPIAMSILIAMAFSMLIVSPISTVAIGLAIGLNGMSASAASMGVASTTAVLVWATMKANKSGVPIAIALGAMKMMMPNFLKHPVMAIPMLMTATVSSLTVPLFKLVGTPASSGFGLVGAVGPIASFEAGASMLIVILSWLVIPFAVGFVSHKICKDILKLYKDDIFVFEGQN
4MY9 Chain:D ((167-242))-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------KYPSLNIIAGNVATAEATKALIEAGANVVKVGIGPGSICTTRVVAGVGVPQLTAVYDCAT-EARKHGIPV-IADGGIKYSGDMVKALAAGAHVVMLGSMFAGVAESPGETEIYQGRQFKVYRGMGSVGAMELVPEGIEGRVPYKGPLADTVHQLVGGLRAGMGYCGAQDLEFLRENA


General information:
TITO was launched using:
RESULT:

Template: 4MY9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -87306 for 552 contacts (-158.2/contact) +
2D Compatibility (PS) -8070 + (NN) -436 + (LL) 14312
1D Compatibility (HY) -2000 + (ID) 1300
Total energy: -84800.0 ( -153.62 by residue)
QMean score : 0.190

(partial model without unconserved sides chains):
PDB file : Tito_4MY9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4MY9-query.scw
PDB file : Tito_Scwrl_4MY9.pdb: