Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKVALIPEKCIACGLCQTYSNIFDYQDDGIVKFSDTDNLEKEVPNSDQDTVLAVKSCPTKALTIL------------------------------------------------------------------------------------- |
| 1JNR Chain:B ((2-150)) | -PSFVNPEKCDGCKALERTACEYICPNDLMTLDKEKMKAYNREPDMCWECYSCVKMCPQGAIDVRGYVDYSPLGGACVPMRGTSDIMWTVKYRNGKVLRFKFAIRTTPWGSIQPFEGFPEPTEEALKSELLAGEPEIIGTSEFPQVKKKA |
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General information:
TITO was launched using:
| RESULT:
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Template: 1JNR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -19809 for 434 contacts (-45.6/contact) +
2D Compatibility (PS) -6309 + (NN) -1449 + (LL) 208
1D Compatibility (HY) 0 + (ID) 600
Total energy: -27959.0 ( -64.42 by residue)
QMean score : 0.407
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