Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MINNVVLVGRMTRDAELRYTPSNQAVATFSLAVNRNFKNQ-SGE--READFINCVIWRQ-QAENLANWAKKGALVGITGRIQTRNYENQQGQRVYVTEVVAE----SFQLLESRATREGGSPNSYNNGGYNNAPSNNSYSASSQQTPNFSRDESPFGNSNPMDISDDDLPF
3ULP Chain:A ((81-194))
SLNKIMLIGRVGCEPDIKILNGGDKVATFSLATNEFWRDRNTNELKSKTDWHRIVVYDQNIVDLIDKYLRKGRRVYVQGSLHTRKWHT--SQPKQITEIILSYNKGDLIFLD-----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3ULP.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -55478 for 617 contacts (-89.9/contact) +
2D Compatibility (PS) -11189 + (NN) -3122 + (LL) -432
1D Compatibility (HY) -9200 + (ID) 1300
Total energy: -80721.0 ( -130.83 by residue)
QMean score : 0.739
(partial model without unconserved sides chains):
PDB file :
Tito_3ULP.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3ULP-query.scw
PDB file :
Tito_Scwrl_3ULP.pdb
: