Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSRTVSKLVINNLDLYYGEFHALKDVNLDIEEKEITAFIGPSGCGKSTLLKSINRMNDLVKNCKITGDITLEGEDVYRQLDINQLRKKVGMVFQKPNPFP-MSIYDNVAFGPRTHGIHSKAELDDIVERSLKQAALWDEVKDRLHKSALGMSGGQQQRLCIARALAIEPDVLLMDEPTSALDPISTAKIEELVIQLKKNY--TIVIVTHNMQQAVRISDKTAFFLMGEVVEYNKTSQLFSLPQDERTENYITGRFG
3RLF Chain:A ((6-234))---------LQNVTKAWGEVVVSKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLETIT-----SGDLFI-GEK--RMNDTPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAG--AKKE---VINQRVNQVAEVLQLAHLLDRKPKALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHYPADRFVAGFIGSPKM


General information:
TITO was launched using:
RESULT:

Template: 3RLF.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -102898 for 1783 contacts (-57.7/contact) +
2D Compatibility (PS) -24208 + (NN) -5949 + (LL) 1896
1D Compatibility (HY) -16800 + (ID) 4100
Total energy: -152059.0 ( -85.28 by residue)
QMean score : 0.489

(partial model without unconserved sides chains):
PDB file : Tito_3RLF.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3RLF-query.scw
PDB file : Tito_Scwrl_3RLF.pdb: