Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MQRFFHFLVWSLTSSATFVFIGILSFFGLNQSIFLSIVYGLASGAAVYIAGIWNARRLFLKKHELTGREYAYIKKNLEEARQKMVRLRKALFQAKSIQMFKQNAEMLRIVRRIYLLTKKEPKRFYQAERFFYQTLDSVVELTEKYAFLSSHPKKSKELSMSLSETRITLTELTKRLEE--DLTQAMGDEIDELQFELDAAKHSLKK |
2FXO Chain:A ((-3-963)) | --------------------------------------------------------------------------------PLLKSAEREKEMASMKEEFTRLKEALEKSEARRKELEEKMVSLLQEKNDLQLQVQAEQDNLADAEERCDQLIKNKIQLEAKVKEMNKRLEDEEEMNAELTAKKRKLEDECSELKRDIDDLELTLAK |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FXO.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 14847 for 483 contacts (30.7/contact) +
2D Compatibility (PS) -13993 + (NN) -11300 + (LL) 7272
1D Compatibility (HY) 11200 + (ID) 550
Total energy: 7476.0 ( 15.48 by residue)
QMean score : 0.312
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