Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MRILEKAPAKINLS----LDVTRKRPDGYHEVEMIMTTIDLADRIELTELAEDEVRVSSHNRFVPDDQRNLAYQAAKLIKDRYNVKKGVSIMITKVIPVAAGLAGGSSDAAATLRGLNRLWNLNLSAETLAELGAEIGSDVSFCVYGGTALATGRGEKIKHISTPPHCWVILAKPTIGVSTAEVYRALKLDGIEH-PDVQGMIEAIEEKSFQKMCSRLGNVLESVTLDMHPEVAMIKNQMKRFGADAVLMSGSGPTVFGLVQYESKVQRIYNGLRGFCDQVYAVRMIGEQNALD |
| 1UEK Chain:A ((1-257)) | --MERLAPAKVNLGLSVRFRRE----DGYHELHTLFAPFSLADRLVVEPVSSG-LHFQ-----GPYGRENLAYRAASLYLEAAGQPGGVRILLEKRIPEGAGLGGGSSDAAQVLLALQALYPA---EVDLFALARTLGADVPFFLLGRGAEARGVGERLKPLAL-PPVPAVVFFPGLRVPTPLVYRAVRPEDFGPDLPVEAILEALARGEEPPYW-NSL---EGPAFRLFPELKEVRGRMRALGLRGVLMSGSGSAFFGLAEGPDHARRAAEALRAW----------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1UEK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129097 for 2073 contacts (-62.3/contact) +
2D Compatibility (PS) -27375 + (NN) -6938 + (LL) 2340
1D Compatibility (HY) -18400 + (ID) 4200
Total energy: -183670.0 ( -88.60 by residue)
QMean score : 0.390
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