Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKAVHTKHAPAAIGPYSQGIIVNNMFYSSGQIPL-TPSGEMVNGDIKEQTHQVFSNLKAVLEEAGASFETVVKATVFIADMEQFAEVNEVYGQYFDTHKPARSCVEVARLPKDALVEIEVIALVK
3MQW Chain:D ((28-146))
----VASPLAPEAVGAYSQAIICNGMVYCSGQIGLDRKTGDFAGKTIEEQSKQVMTNLKYVLEEAGSSMDKVVKTTCLLADIKDFGVFNGIYAEAFGNHKPARACFAAAALPKGALVEVECIA---
General information:
TITO was launched using:
RESULT:
Template:
3MQW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -62161 for 896 contacts (-69.4/contact) +
2D Compatibility (PS) -12781 + (NN) -4686 + (LL) 900
1D Compatibility (HY) -14000 + (ID) 3050
Total energy: -95778.0 ( -106.90 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3MQW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3MQW-query.scw
PDB file :
Tito_Scwrl_3MQW.pdb
: