Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAGKITVVGLGAGDMDQLTIGIHKLLTKADTLYVRTKDHPLIEELEKETKNIRFFDDIYEKHDQFEAVYEEIADILFEAARREDVVYAVPGHPFVAEKTVQLLTERQEKENVQVKVAGGQSFLDATFNVLQIDPIEGFQFVDAGTLSADELELRHHLIICQVYDQMTASEVKLTLMEKLPDDYEVVIVTAAGSRGEEIRTVPLFELDRNVALNNLTSVYIPPIKEEKLLYHEFSTFRSIIRELRGP-NGCPWDKKQTHQSLKQYMIEECYELLEAIDEEDTDHMIEELGDVLLQVLLHAQIGEDEGYFTIDDVIKGISEKMVRRHPHVFKDVKVQDENDVLANWEDIKKAEK-NTSESSLLDSVPKTLPALSKAAKLQKKAAKVGFDWEDVSDIWEKVSEEMKEFSSEVSEAPH-EHNLKAEFGDILFALVNVARFYKIEPEEALTMTNDKFRRRFSYIEETAKEEGVELADMSLEDMDKLWNEAKETERRS |
| 3CRA Chain:A ((2-260)) | --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------NQIDRLLTIMQRLRDPENGCPWDKEQTFATIAPYTLEETYEVLDAIAREDFDDLRGELGDLLFQVVFYAQMAQEEGRFDFNDICAAISDKLERRLAR----------------WEQIKTEERAQKAQHSALDDIPRSLPALMRAQKIQKRCANVGFDWTTLGPVVDKVYEEIDEVMYEARQAVVDQAKLEEEMGDLLFATVNLARHLGTKAEIALQKANEKFERRFREVERIVAARGLEMTE----TMEEVWQQVKRQE--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CRA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -2116 for 1356 contacts (-1.6/contact) +
2D Compatibility (PS) -25949 + (NN) -16504 + (LL) 20640
1D Compatibility (HY) -20000 + (ID) 4950
Total energy: -48879.0 ( -36.05 by residue)
QMean score : 0.414
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