Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MRLDKFLKVSRLIKRRTLAKEVADQGRISINGNQAK-ASSDVKPGDELTVRFGQKLVTVQVNELKDTTKKEEAANMYTILKEEKLGE
1VIO Chain:A ((3-53))
LRLDKFIAENVGLTRS-QATKAIRQSAVKINGEIVKSGSVQISQEDEIYF-------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
1VIO.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -14953 for 312 contacts (-47.9/contact) +
2D Compatibility (PS) -5093 + (NN) -1426 + (LL) 3232
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -21390.0 ( -68.56 by residue)
QMean score : 0.534
(partial model without unconserved sides chains):
PDB file :
Tito_1VIO.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1VIO-query.scw
PDB file :
Tito_Scwrl_1VIO.pdb
: