Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | ----MSYDVVIPAAGQGKRMKAGRNKLFIELKGDPVIIHTLRVFDSHRQCDKIILVINEQEREHFQQLLSDYPFQTSIELVAGGDERQHSVYKGLKAVKQEK---------IVLVHDGARPFIKHEQIDELIAEAEQTGAAILAVPVKDTIKRV-QDLQVSETIERSSLWAVQTPQAFRLSLLMKAHAEA-ERKGFLGTDDASLVEQMEGGSVRVVEGSYTNIKLTTPDDLTSAEAIMESESGNKHV--------------------------------------------------------------------------------------------------------------------------------------------------------- |
| 4CVH Chain:A ((1-411)) | SMHPQAVAAVLPAGPTPKQ--------FCPILERPLISYTLQALERVCWIKDIVVAVTGENMEVMKSIIQKYQHK-RISLVEAGVTRHRSIFNGLKALAEDQINSKLSKPEVVIIHDAVRPFVEEGVLLKVVTAAKEHGAAGAIRPLVSTVVSPSADGCLDYSLERARHRASEMPQAFLFDVIYEAYQQCSDYDLEFGTECLQLALKYCCTKAKLVEGSPDLWKVTYKRDLYAAESIIKERISQEICVVMDTEEDNKHVGHLLEEVLKSELNHVKVTSEALDQCYNFVCVNVTTSDFQETQKLLSMLEESSLCILYPVVVVSVHFLDFKLVPPSQKMENLMQIREFAKEVKERNILLYGLLISYPQDDQKLQESLRQGAIIIASLIKERNSGLIGQLLIA |
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General information:
TITO was launched using:
| RESULT:
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Template: 4CVH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -122675 for 1755 contacts (-69.9/contact) +
2D Compatibility (PS) -24456 + (NN) -9768 + (LL) 556
1D Compatibility (HY) -14800 + (ID) 2850
Total energy: -173993.0 ( -99.14 by residue)
QMean score : 0.536
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