Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSQQHDYVIGKNAVIETLKSDRKLYKLWMAENTVKGQAQQVIELAKKQGITIQYVPRKKLDQMVTGQHQGVVAQVAAYEYAELDDLYKAAEEKNEQPFFLILDELEDPHNLGSIMRTADAVGAHGIVIPKRR--AVGLTTTVAKASTGAIEHIPVARVTNLARTLEEMKERGIWVVGTDASA-REDFRNMDGNMPLALVIGSEGKGMGRLVKEKCDFLIKLPMAGKVTSLNASVAAGLLMYEVYRKRNPVGE |
1ZJR Chain:A ((22-176)) | ---------------------------------------------------------------------------------------------RQKDLIVFADNVKNEHNFSAIVRTCDAVGVLYLYYYHAEGKKAKINE---GITQGSHKWVFIEKVDNPVQKLLEFKNRGFQIVATWLSKESVNFREVDYTKPTVLVVGNELQGVSPEIVEIADKKIVIPMYGMAQSLNVSVATGIILYEAQRQREEKG- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 1ZJR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -90268 for 1202 contacts (-75.1/contact) +
2D Compatibility (PS) -17186 + (NN) -9944 + (LL) 8896
1D Compatibility (HY) -8800 + (ID) 2400
Total energy: -119702.0 ( -99.59 by residue)
QMean score : 0.583
|
|
|